Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 AL137060.1-201ENST00000618151 2648 ntBASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 MESTP1-201ENST00000404287 994 ntBASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 ECEL1P2-202ENST00000465689 757 ntBASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 C2orf69P3-201ENST00000565542 1120 ntBASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 WWOX-216ENST00000569818 525 ntBASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TMEFF1Q8IYR6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 C1QL1P1-201ENST00000568105 661 ntBASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEFF1Q8IYR6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEFF1Q8IYR6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 AC006011.2-201ENST00000621313 1158 ntBASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEFF1Q8IYR6 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 CRYGFP-201ENST00000418459 633 ntBASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 B3GAT3P1-201ENST00000471720 806 ntBASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 AC011506.1-201ENST00000474329 610 ntBASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 AL445675.2-201ENST00000620291 557 ntBASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
TMEFF1Q8IYR6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms