Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC105Q8IYK2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC105Q8IYK2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCDC105Q8IYK2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC105Q8IYK2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC105Q8IYK2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.3■■□□□ 1
CCDC105Q8IYK2 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 AC100791.3-201ENST00000617619 330 ntBASIC21.29■■□□□ 1
CCDC105Q8IYK2 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC105Q8IYK2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC105Q8IYK2 KRT17P2-201ENST00000300992 1314 ntBASIC21.29■■□□□ 1
CCDC105Q8IYK2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC105Q8IYK2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC105Q8IYK2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC105Q8IYK2 AC069544.1-201ENST00000609399 999 ntBASIC21.28■■□□□ 1
CCDC105Q8IYK2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC105Q8IYK2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC105Q8IYK2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.28■■□□□ 1
CCDC105Q8IYK2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CCDC105Q8IYK2 AC092720.2-201ENST00000602388 1665 ntBASIC21.28■■□□□ 1
CCDC105Q8IYK2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.28■■□□□ 1
CCDC105Q8IYK2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 AC233702.5-201ENST00000584107 538 ntBASIC21.27■■□□□ 1
CCDC105Q8IYK2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC105Q8IYK2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.27■■□□□ 1
CCDC105Q8IYK2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC105Q8IYK2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC105Q8IYK2 AC092368.3-202ENST00000574180 1591 ntBASIC21.27■□□□□ 0.99
CCDC105Q8IYK2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.27■□□□□ 0.99
CCDC105Q8IYK2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 AC091799.1-201ENST00000422823 811 ntBASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 AC133561.5-201ENST00000635547 218 ntBASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC105Q8IYK2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 AL589743.5-201ENST00000616611 1050 ntBASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC105Q8IYK2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms