Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 KRT16P6-202ENST00000425692 1426 ntBASIC19.42■□□□□ 0.7
TRIM48Q8IWZ4 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 AC124016.1-201ENST00000609552 612 ntBASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 AC138932.1-201ENST00000534164 6830 ntBASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM48Q8IWZ4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 MIR718-201ENST00000390190 70 ntBASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 RPS2P4-201ENST00000476944 856 ntBASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 AC008550.1-201ENST00000511500 884 ntBASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM48Q8IWZ4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM48Q8IWZ4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 AC110285.5-201ENST00000611501 352 ntBASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM48Q8IWZ4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 AC133681.1-201ENST00000465482 601 ntBASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM48Q8IWZ4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms