Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CRLF3Q8IUI8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CRLF3Q8IUI8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CRLF3Q8IUI8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CRLF3Q8IUI8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CRLF3Q8IUI8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 AP001160.3-201ENST00000601484 763 ntBASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CRLF3Q8IUI8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 RAP2CP1-201ENST00000605103 478 ntBASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 AC011767.1-201ENST00000617410 1153 ntBASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.71■□□□□ 0.75
CRLF3Q8IUI8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
CRLF3Q8IUI8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CRLF3Q8IUI8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 AC026185.1-201ENST00000445748 174 ntBASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 UBE2DNL-204ENST00000602536 740 ntBASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CRLF3Q8IUI8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CRLF3Q8IUI8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms