Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD1LQ86WJ1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1LQ86WJ1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CHD1LQ86WJ1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 AC092118.2-201ENST00000613495 667 ntBASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CHD1LQ86WJ1 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHD1LQ86WJ1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHD1LQ86WJ1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHD1LQ86WJ1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 TSPY6P-201ENST00000448518 926 ntBASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 AC018553.1-201ENST00000616682 1458 ntBASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CHD1LQ86WJ1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1LQ86WJ1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 AC116351.2-201ENST00000606540 1585 ntBASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 AC091874.3-201ENST00000512672 1195 ntBASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 AC005829.2-201ENST00000571422 1056 ntBASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.43■■□□□ 1.5
CHD1LQ86WJ1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
CHD1LQ86WJ1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD1LQ86WJ1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms