Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 KRT8P36-201ENST00000489121 1440 ntBASIC16.8■□□□□ 0.28
CSMD2Q7Z408 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CSMD2Q7Z408 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 AC009078.2-202ENST00000463353 338 ntBASIC16.79■□□□□ 0.28
CSMD2Q7Z408 AL023803.3-201ENST00000615559 522 ntBASIC16.79■□□□□ 0.28
CSMD2Q7Z408 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 SLC25A1P2-201ENST00000430693 912 ntBASIC16.79■□□□□ 0.28
CSMD2Q7Z408 CCR12P-201ENST00000446203 998 ntBASIC16.79■□□□□ 0.28
CSMD2Q7Z408 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 AC011484.1-201ENST00000377652 1995 ntBASIC16.79■□□□□ 0.28
CSMD2Q7Z408 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CSMD2Q7Z408 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 AC004980.1-204ENST00000429707 299 ntBASIC16.78■□□□□ 0.28
CSMD2Q7Z408 AC011506.1-201ENST00000474329 610 ntBASIC16.78■□□□□ 0.28
CSMD2Q7Z408 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CSMD2Q7Z408 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CSMD2Q7Z408 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.77■□□□□ 0.27
CSMD2Q7Z408 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
CSMD2Q7Z408 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD2Q7Z408 HYMAI.1-201ENST00000620949 238 ntBASIC16.77■□□□□ 0.27
CSMD2Q7Z408 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD2Q7Z408 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CSMD2Q7Z408 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CSMD2Q7Z408 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 AC008040.2-201ENST00000461049 708 ntBASIC16.76■□□□□ 0.27
CSMD2Q7Z408 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CSMD2Q7Z408 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms