Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CD109Q6YHK3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CD109Q6YHK3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC30.35■■■□□ 2.45
CD109Q6YHK3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CD109Q6YHK3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CD109Q6YHK3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CD109Q6YHK3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CD109Q6YHK3 KRT8P17-201ENST00000453110 1448 ntBASIC30.34■■■□□ 2.45
CD109Q6YHK3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 H19-201ENST00000411754 1788 ntTSL 5 BASIC30.34■■■□□ 2.45
CD109Q6YHK3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CD109Q6YHK3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CD109Q6YHK3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CD109Q6YHK3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
CD109Q6YHK3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CD109Q6YHK3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CD109Q6YHK3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC30.33■■■□□ 2.45
CD109Q6YHK3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC30.33■■■□□ 2.45
CD109Q6YHK3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CD109Q6YHK3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CD109Q6YHK3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CD109Q6YHK3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CD109Q6YHK3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC30.32■■■□□ 2.44
CD109Q6YHK3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC30.32■■■□□ 2.44
CD109Q6YHK3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CD109Q6YHK3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC30.32■■■□□ 2.44
CD109Q6YHK3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CD109Q6YHK3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CD109Q6YHK3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.32■■■□□ 2.44
CD109Q6YHK3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CD109Q6YHK3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
CD109Q6YHK3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC30.31■■■□□ 2.44
CD109Q6YHK3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC30.31■■■□□ 2.44
CD109Q6YHK3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC30.31■■■□□ 2.44
CD109Q6YHK3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC30.31■■■□□ 2.44
CD109Q6YHK3 NPAP1P7-201ENST00000613027 823 ntBASIC30.31■■■□□ 2.44
CD109Q6YHK3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CD109Q6YHK3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CD109Q6YHK3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CD109Q6YHK3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.31■■■□□ 2.44
CD109Q6YHK3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 ZNF444P1-201ENST00000559497 298 ntBASIC30.3■■■□□ 2.44
CD109Q6YHK3 RN7SL510P-201ENST00000581311 263 ntBASIC30.3■■■□□ 2.44
CD109Q6YHK3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
CD109Q6YHK3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CD109Q6YHK3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CD109Q6YHK3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC30.3■■■□□ 2.44
CD109Q6YHK3 HYMAI.1-201ENST00000620949 238 ntBASIC30.3■■■□□ 2.44
CD109Q6YHK3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC30.29■■■□□ 2.44
CD109Q6YHK3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 AC112907.2-201ENST00000448639 330 ntBASIC30.29■■■□□ 2.44
CD109Q6YHK3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 AC140113.3-201ENST00000605663 199 ntBASIC30.29■■■□□ 2.44
CD109Q6YHK3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CD109Q6YHK3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC30.29■■■□□ 2.44
CD109Q6YHK3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
CD109Q6YHK3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
CD109Q6YHK3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CD109Q6YHK3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CD109Q6YHK3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC30.28■■■□□ 2.44
CD109Q6YHK3 GOLGA6L3-201ENST00000507199 1679 ntBASIC30.28■■■□□ 2.44
CD109Q6YHK3 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CD109Q6YHK3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CD109Q6YHK3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CD109Q6YHK3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC30.28■■■□□ 2.44
CD109Q6YHK3 AC023511.2-201ENST00000618803 211 ntBASIC30.28■■■□□ 2.44
CD109Q6YHK3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CD109Q6YHK3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CD109Q6YHK3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
CD109Q6YHK3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CD109Q6YHK3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.27■■■□□ 2.44
CD109Q6YHK3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
CD109Q6YHK3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CD109Q6YHK3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC30.27■■■□□ 2.44
CD109Q6YHK3 Z85996.1-201ENST00000494644 937 ntBASIC30.27■■■□□ 2.44
CD109Q6YHK3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC30.27■■■□□ 2.44
CD109Q6YHK3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC30.27■■■□□ 2.44
CD109Q6YHK3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC30.26■■■□□ 2.44
CD109Q6YHK3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CD109Q6YHK3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CD109Q6YHK3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms