Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC011506.1-201ENST00000474329 610 ntBASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC30.76■■■□□ 2.51
CCDC18Q5T9S5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 RCC2P6-201ENST00000526625 1557 ntBASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC18Q5T9S5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 TSPY14P-201ENST00000303979 915 ntBASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC18Q5T9S5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 PTPA-216ENST00000432651 857 ntTSL 2 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC18Q5T9S5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 AC096733.2-201ENST00000609937 1394 ntBASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC18Q5T9S5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 AL049597.2-201ENST00000565575 961 ntBASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 GRAMD4P8-201ENST00000605465 1115 ntBASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
CCDC18Q5T9S5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 AC131212.4-201ENST00000623606 975 ntBASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
CCDC18Q5T9S5 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC30.7■■■□□ 2.5
CCDC18Q5T9S5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC30.7■■■□□ 2.5
CCDC18Q5T9S5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC18Q5T9S5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC18Q5T9S5 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC18Q5T9S5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 TMEM179-206ENST00000616017 1645 ntBASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC18Q5T9S5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
CCDC18Q5T9S5 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms