Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RUNDC3AQ59EK9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 RARRES2P4-201ENST00000514074 484 ntBASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 NTF6G-201ENST00000591094 616 ntBASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.68■□□□□ 0.58
RUNDC3AQ59EK9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 AC105020.6-201ENST00000621523 1217 ntBASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RUNDC3AQ59EK9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RUNDC3AQ59EK9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 KRT18P68-201ENST00000392293 1000 ntBASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RUNDC3AQ59EK9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms