Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19■□□□□ 0.63
PDCD4Q53EL6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDCD4Q53EL6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
PDCD4Q53EL6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19■□□□□ 0.63
PDCD4Q53EL6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19■□□□□ 0.63
PDCD4Q53EL6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDCD4Q53EL6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 MCRIP2P1-201ENST00000394346 511 ntBASIC18.99■□□□□ 0.63
PDCD4Q53EL6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDCD4Q53EL6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PDCD4Q53EL6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.97■□□□□ 0.63
PDCD4Q53EL6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 AC105020.6-201ENST00000621523 1217 ntBASIC18.97■□□□□ 0.63
PDCD4Q53EL6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PDCD4Q53EL6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 ZNRF2P3-201ENST00000424200 374 ntBASIC18.96■□□□□ 0.63
PDCD4Q53EL6 RARRES2P4-201ENST00000514074 484 ntBASIC18.96■□□□□ 0.63
PDCD4Q53EL6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PDCD4Q53EL6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms