Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCSMST1Q4G0I0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 POM121L13P-201ENST00000422362 380 ntBASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCSMST1Q4G0I0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 AC116351.2-201ENST00000606540 1585 ntBASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCSMST1Q4G0I0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 POU5F1P3-201ENST00000428824 1078 ntBASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCSMST1Q4G0I0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 TMEM179-206ENST00000616017 1645 ntBASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 AC006058.3-201ENST00000606217 1069 ntBASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 TFP1-202ENST00000475455 1573 ntBASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 AC009237.14-201ENST00000609975 1594 ntBASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCSMST1Q4G0I0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCSMST1Q4G0I0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCSMST1Q4G0I0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCSMST1Q4G0I0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCSMST1Q4G0I0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.22■□□□□ 0.67
CCSMST1Q4G0I0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCSMST1Q4G0I0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms