Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HIST1H1AQ02539 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.11■□□□□ 0.01
HIST1H1AQ02539 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AC013268.1-206ENST00000638368 961 ntBASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AC112229.1-201ENST00000639295 961 ntBASIC15.1■□□□□ 0.01
HIST1H1AQ02539 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC15.1■□□□□ 0.01
HIST1H1AQ02539 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 AC120498.9-201ENST00000339021 3867 ntBASIC15.09■□□□□ 0.01
HIST1H1AQ02539 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HIST1H1AQ02539 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.08■□□□□ 0.01
HIST1H1AQ02539 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H1AQ02539 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
HIST1H1AQ02539 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.08■□□□□ 0.01
HIST1H1AQ02539 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms