Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
NKX6-1P78426 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.41■□□□□ 0.38
NKX6-1P78426 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.41■□□□□ 0.38
NKX6-1P78426 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NKX6-1P78426 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 AC007225.1-201ENST00000566331 1836 ntBASIC17.4■□□□□ 0.38
NKX6-1P78426 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 AIRN-201ENST00000601203 4374 ntBASIC17.4■□□□□ 0.38
NKX6-1P78426 FP700111.2-201ENST00000619190 1892 ntBASIC17.4■□□□□ 0.38
NKX6-1P78426 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 AL049637.2-201ENST00000641778 930 ntBASIC17.4■□□□□ 0.38
NKX6-1P78426 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 AC007952.6-201ENST00000573168 2673 ntBASIC17.4■□□□□ 0.38
NKX6-1P78426 AC003957.1-201ENST00000625108 2673 ntBASIC17.4■□□□□ 0.38
NKX6-1P78426 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.4■□□□□ 0.38
NKX6-1P78426 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.4■□□□□ 0.38
NKX6-1P78426 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NKX6-1P78426 AL135905.2-201ENST00000584934 1404 ntBASIC17.39■□□□□ 0.38
NKX6-1P78426 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NKX6-1P78426 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NKX6-1P78426 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX6-1P78426 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX6-1P78426 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.39■□□□□ 0.37
NKX6-1P78426 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
NKX6-1P78426 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX6-1P78426 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.39■□□□□ 0.37
NKX6-1P78426 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
NKX6-1P78426 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX6-1P78426 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.39■□□□□ 0.37
NKX6-1P78426 MIR4785-201ENST00000585005 73 ntBASIC17.39■□□□□ 0.37
NKX6-1P78426 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NKX6-1P78426 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.39■□□□□ 0.37
NKX6-1P78426 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NKX6-1P78426 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-1P78426 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.38■□□□□ 0.37
NKX6-1P78426 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NKX6-1P78426 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.38■□□□□ 0.37
NKX6-1P78426 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NKX6-1P78426 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 AL023875.1-201ENST00000640777 796 ntBASIC17.38■□□□□ 0.37
NKX6-1P78426 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
NKX6-1P78426 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NKX6-1P78426 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms