Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.07■□□□□ 0.16
SPCS3P61009 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.07■□□□□ 0.16
SPCS3P61009 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.07■□□□□ 0.16
SPCS3P61009 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 AC005332.7-201ENST00000614046 2005 ntBASIC16.07■□□□□ 0.16
SPCS3P61009 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SPCS3P61009 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SPCS3P61009 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.07■□□□□ 0.16
SPCS3P61009 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SPCS3P61009 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SPCS3P61009 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 TREX1-205ENST00000625293 1783 ntBASIC16.06■□□□□ 0.16
SPCS3P61009 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.06■□□□□ 0.16
SPCS3P61009 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.06■□□□□ 0.16
SPCS3P61009 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.06■□□□□ 0.16
SPCS3P61009 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.06■□□□□ 0.16
SPCS3P61009 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.06■□□□□ 0.16
SPCS3P61009 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SPCS3P61009 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS3P61009 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.06■□□□□ 0.16
SPCS3P61009 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS3P61009 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.05■□□□□ 0.16
SPCS3P61009 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SPCS3P61009 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SPCS3P61009 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SPCS3P61009 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 AC087633.2-202ENST00000565166 1439 ntBASIC16.05■□□□□ 0.16
SPCS3P61009 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SPCS3P61009 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SPCS3P61009 AC005837.3-201ENST00000612163 286 ntBASIC16.05■□□□□ 0.16
SPCS3P61009 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.05■□□□□ 0.16
SPCS3P61009 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SPCS3P61009 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS3P61009 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SPCS3P61009 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.04■□□□□ 0.16
SPCS3P61009 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.04■□□□□ 0.16
SPCS3P61009 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SPCS3P61009 YBX1P1-201ENST00000445822 960 ntBASIC16.04■□□□□ 0.16
SPCS3P61009 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.04■□□□□ 0.16
SPCS3P61009 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.04■□□□□ 0.16
SPCS3P61009 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.04■□□□□ 0.16
SPCS3P61009 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.04■□□□□ 0.16
SPCS3P61009 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SPCS3P61009 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.04■□□□□ 0.16
SPCS3P61009 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SPCS3P61009 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS3P61009 AC098818.2-201ENST00000564925 2320 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms