Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC018553.1-201ENST00000616682 1458 ntBASIC19.6■□□□□ 0.73
CLDN2P57739 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLDN2P57739 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CLDN2P57739 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLDN2P57739 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN2P57739 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN2P57739 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.58■□□□□ 0.73
CLDN2P57739 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CLDN2P57739 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN2P57739 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.58■□□□□ 0.73
CLDN2P57739 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLDN2P57739 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CLDN2P57739 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.58■□□□□ 0.72
CLDN2P57739 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN2P57739 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN2P57739 CR392000.1-201ENST00000624770 1228 ntBASIC19.58■□□□□ 0.72
CLDN2P57739 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.58■□□□□ 0.72
CLDN2P57739 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN2P57739 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLDN2P57739 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CLDN2P57739 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.58■□□□□ 0.72
CLDN2P57739 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN2P57739 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CLDN2P57739 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN2P57739 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 TFP1-202ENST00000475455 1573 ntBASIC19.57■□□□□ 0.72
CLDN2P57739 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN2P57739 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN2P57739 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN2P57739 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN2P57739 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN2P57739 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN2P57739 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.57■□□□□ 0.72
CLDN2P57739 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN2P57739 AL353708.3-201ENST00000610272 989 ntBASIC19.57■□□□□ 0.72
CLDN2P57739 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN2P57739 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN2P57739 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN2P57739 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CLDN2P57739 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
CLDN2P57739 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CLDN2P57739 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLDN2P57739 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CLDN2P57739 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.56■□□□□ 0.72
CLDN2P57739 NUDT16P1-203ENST00000513809 620 ntBASIC19.56■□□□□ 0.72
CLDN2P57739 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLDN2P57739 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN2P57739 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.55■□□□□ 0.72
CLDN2P57739 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLDN2P57739 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CLDN2P57739 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms