Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB38P57729 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB38P57729 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.64■□□□□ 0.58
RAB38P57729 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.64■□□□□ 0.58
RAB38P57729 AC009237.14-201ENST00000609975 1594 ntBASIC18.64■□□□□ 0.58
RAB38P57729 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RAB38P57729 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 KRT18P29-201ENST00000397031 1267 ntBASIC18.64■□□□□ 0.57
RAB38P57729 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB38P57729 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB38P57729 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.64■□□□□ 0.57
RAB38P57729 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB38P57729 MTDHP1-201ENST00000605323 784 ntBASIC18.64■□□□□ 0.57
RAB38P57729 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB38P57729 TMEM179-206ENST00000616017 1645 ntBASIC18.63■□□□□ 0.57
RAB38P57729 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB38P57729 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB38P57729 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB38P57729 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB38P57729 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB38P57729 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.63■□□□□ 0.57
RAB38P57729 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB38P57729 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB38P57729 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB38P57729 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB38P57729 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB38P57729 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB38P57729 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAB38P57729 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB38P57729 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB38P57729 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
RAB38P57729 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB38P57729 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB38P57729 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RAB38P57729 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB38P57729 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB38P57729 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB38P57729 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB38P57729 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB38P57729 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB38P57729 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB38P57729 RN7SL471P-201ENST00000580476 299 ntBASIC18.61■□□□□ 0.57
RAB38P57729 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
RAB38P57729 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB38P57729 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms