Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
GFERP55789 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.97■□□□□ 0.63
GFERP55789 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.97■□□□□ 0.63
GFERP55789 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.97■□□□□ 0.63
GFERP55789 AL353708.3-201ENST00000610272 989 ntBASIC18.97■□□□□ 0.63
GFERP55789 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
GFERP55789 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 BX119927.1-201ENST00000636596 1552 ntBASIC18.97■□□□□ 0.63
GFERP55789 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.97■□□□□ 0.63
GFERP55789 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.97■□□□□ 0.63
GFERP55789 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
GFERP55789 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
GFERP55789 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.96■□□□□ 0.63
GFERP55789 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
GFERP55789 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.96■□□□□ 0.63
GFERP55789 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.96■□□□□ 0.63
GFERP55789 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.96■□□□□ 0.63
GFERP55789 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
GFERP55789 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
GFERP55789 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.95■□□□□ 0.62
GFERP55789 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
GFERP55789 AC087499.1-201ENST00000418141 1075 ntBASIC18.95■□□□□ 0.62
GFERP55789 NIFKP9-201ENST00000419265 221 ntBASIC18.95■□□□□ 0.62
GFERP55789 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.95■□□□□ 0.62
GFERP55789 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
GFERP55789 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 CR392000.1-201ENST00000624770 1228 ntBASIC18.95■□□□□ 0.62
GFERP55789 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.95■□□□□ 0.62
GFERP55789 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.95■□□□□ 0.62
GFERP55789 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.95■□□□□ 0.62
GFERP55789 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
GFERP55789 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.94■□□□□ 0.62
GFERP55789 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
GFERP55789 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
GFERP55789 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 YBX1P10-201ENST00000444752 975 ntBASIC18.94■□□□□ 0.62
GFERP55789 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 NUDT16P1-203ENST00000513809 620 ntBASIC18.94■□□□□ 0.62
GFERP55789 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.94■□□□□ 0.62
GFERP55789 C1QL1P1-201ENST00000568105 661 ntBASIC18.94■□□□□ 0.62
GFERP55789 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.94■□□□□ 0.62
GFERP55789 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.94■□□□□ 0.62
GFERP55789 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
GFERP55789 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
GFERP55789 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
GFERP55789 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
GFERP55789 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFERP55789 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.93■□□□□ 0.62
GFERP55789 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
GFERP55789 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms