Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LBX1P52954 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.6■■□□□ 1.21
LBX1P52954 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 HLA-G-202ENST00000376815 851 ntBASIC22.59■■□□□ 1.21
LBX1P52954 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
LBX1P52954 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.59■■□□□ 1.21
LBX1P52954 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 AP000523.1-201ENST00000398242 1049 ntBASIC22.59■■□□□ 1.21
LBX1P52954 SPDYE15P-201ENST00000424157 909 ntBASIC22.59■■□□□ 1.21
LBX1P52954 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC22.59■■□□□ 1.21
LBX1P52954 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.59■■□□□ 1.21
LBX1P52954 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.59■■□□□ 1.21
LBX1P52954 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LBX1P52954 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.59■■□□□ 1.21
LBX1P52954 LINC01711-201ENST00000598340 967 ntBASIC22.59■■□□□ 1.21
LBX1P52954 AL121672.3-201ENST00000608644 468 ntBASIC22.59■■□□□ 1.21
LBX1P52954 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LBX1P52954 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LBX1P52954 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
LBX1P52954 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.58■■□□□ 1.21
LBX1P52954 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.58■■□□□ 1.21
LBX1P52954 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LBX1P52954 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LBX1P52954 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
LBX1P52954 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.58■■□□□ 1.21
LBX1P52954 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.58■■□□□ 1.21
LBX1P52954 GCSHP2-201ENST00000560971 527 ntBASIC22.58■■□□□ 1.21
LBX1P52954 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LBX1P52954 AL139424.1-201ENST00000607572 797 ntBASIC22.58■■□□□ 1.21
LBX1P52954 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.58■■□□□ 1.21
LBX1P52954 BX119927.1-201ENST00000636596 1552 ntBASIC22.58■■□□□ 1.2
LBX1P52954 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
LBX1P52954 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.58■■□□□ 1.2
LBX1P52954 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LBX1P52954 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.58■■□□□ 1.2
LBX1P52954 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.58■■□□□ 1.2
LBX1P52954 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC22.57■■□□□ 1.2
LBX1P52954 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
LBX1P52954 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LBX1P52954 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LBX1P52954 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LBX1P52954 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.57■■□□□ 1.2
LBX1P52954 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.57■■□□□ 1.2
LBX1P52954 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.57■■□□□ 1.2
LBX1P52954 AP002414.4-201ENST00000589764 1148 ntBASIC22.57■■□□□ 1.2
LBX1P52954 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC22.57■■□□□ 1.2
LBX1P52954 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LBX1P52954 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LBX1P52954 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.57■■□□□ 1.2
LBX1P52954 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.57■■□□□ 1.2
LBX1P52954 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.57■■□□□ 1.2
LBX1P52954 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LBX1P52954 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LBX1P52954 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LBX1P52954 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LBX1P52954 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LBX1P52954 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC22.56■■□□□ 1.2
LBX1P52954 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.56■■□□□ 1.2
LBX1P52954 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
LBX1P52954 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
LBX1P52954 AL121772.3-201ENST00000610840 674 ntBASIC22.56■■□□□ 1.2
LBX1P52954 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LBX1P52954 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
LBX1P52954 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.56■■□□□ 1.2
LBX1P52954 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LBX1P52954 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
LBX1P52954 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
LBX1P52954 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC22.55■■□□□ 1.2
LBX1P52954 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC22.55■■□□□ 1.2
LBX1P52954 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC22.55■■□□□ 1.2
LBX1P52954 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.55■■□□□ 1.2
LBX1P52954 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
LBX1P52954 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LBX1P52954 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LBX1P52954 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LBX1P52954 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LBX1P52954 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
LBX1P52954 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.54■■□□□ 1.2
LBX1P52954 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
LBX1P52954 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LBX1P52954 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.54■■□□□ 1.2
LBX1P52954 AP003041.3-201ENST00000527151 707 ntBASIC22.54■■□□□ 1.2
LBX1P52954 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.54■■□□□ 1.2
LBX1P52954 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms