Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.25■□□□□ 0.67
PDX1P52945 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.25■□□□□ 0.67
PDX1P52945 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PDX1P52945 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDX1P52945 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PDX1P52945 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.25■□□□□ 0.67
PDX1P52945 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PDX1P52945 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PDX1P52945 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.24■□□□□ 0.67
PDX1P52945 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDX1P52945 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.24■□□□□ 0.67
PDX1P52945 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.24■□□□□ 0.67
PDX1P52945 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.24■□□□□ 0.67
PDX1P52945 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.24■□□□□ 0.67
PDX1P52945 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PDX1P52945 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.24■□□□□ 0.67
PDX1P52945 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDX1P52945 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.23■□□□□ 0.67
PDX1P52945 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 FAM197Y1-201ENST00000421178 764 ntBASIC19.23■□□□□ 0.67
PDX1P52945 AL353807.1-201ENST00000427475 662 ntBASIC19.23■□□□□ 0.67
PDX1P52945 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.23■□□□□ 0.67
PDX1P52945 AL121906.2-201ENST00000621597 723 ntBASIC19.23■□□□□ 0.67
PDX1P52945 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.23■□□□□ 0.67
PDX1P52945 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.23■□□□□ 0.67
PDX1P52945 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
PDX1P52945 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.23■□□□□ 0.67
PDX1P52945 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PDX1P52945 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.22■□□□□ 0.67
PDX1P52945 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.22■□□□□ 0.67
PDX1P52945 AL355355.2-201ENST00000442321 338 ntBASIC19.22■□□□□ 0.67
PDX1P52945 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PDX1P52945 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.22■□□□□ 0.67
PDX1P52945 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.22■□□□□ 0.67
PDX1P52945 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PDX1P52945 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PDX1P52945 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.21■□□□□ 0.67
PDX1P52945 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.21■□□□□ 0.67
PDX1P52945 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.21■□□□□ 0.67
PDX1P52945 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PDX1P52945 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PDX1P52945 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.21■□□□□ 0.67
PDX1P52945 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PDX1P52945 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.21■□□□□ 0.67
PDX1P52945 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.21■□□□□ 0.67
PDX1P52945 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.21■□□□□ 0.67
PDX1P52945 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PDX1P52945 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.21■□□□□ 0.67
PDX1P52945 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PDX1P52945 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
PDX1P52945 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PDX1P52945 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms