Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC018445.3-201ENST00000624177 1945 ntBASIC20.72■□□□□ 0.91
SLC1A1P43005 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
SLC1A1P43005 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC1A1P43005 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
SLC1A1P43005 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC1A1P43005 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC1A1P43005 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC1A1P43005 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
SLC1A1P43005 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC1A1P43005 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC1A1P43005 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC1A1P43005 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC1A1P43005 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC1A1P43005 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC1A1P43005 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 AC092437.1-201ENST00000624794 1048 ntBASIC20.71■□□□□ 0.91
SLC1A1P43005 AC073111.5-205ENST00000641717 521 ntBASIC20.71■□□□□ 0.91
SLC1A1P43005 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SLC1A1P43005 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC1A1P43005 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC1A1P43005 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 MKRN4P-201ENST00000444706 1521 ntBASIC20.7■□□□□ 0.9
SLC1A1P43005 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A1P43005 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 GPX1P1-201ENST00000388829 606 ntBASIC20.7■□□□□ 0.9
SLC1A1P43005 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A1P43005 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC1A1P43005 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SLC1A1P43005 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC1A1P43005 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SLC1A1P43005 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 Z82202.1-201ENST00000623446 1880 ntBASIC20.7■□□□□ 0.9
SLC1A1P43005 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SLC1A1P43005 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLC1A1P43005 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC1A1P43005 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC1A1P43005 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
SLC1A1P43005 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC1A1P43005 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SLC1A1P43005 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC1A1P43005 CDCA4P2-201ENST00000441182 718 ntBASIC20.69■□□□□ 0.9
SLC1A1P43005 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC1A1P43005 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.69■□□□□ 0.9
SLC1A1P43005 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC1A1P43005 AF201337.1-201ENST00000520239 748 ntBASIC20.69■□□□□ 0.9
SLC1A1P43005 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC1A1P43005 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC1A1P43005 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SLC1A1P43005 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SLC1A1P43005 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC1A1P43005 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC1A1P43005 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC1A1P43005 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.68■□□□□ 0.9
SLC1A1P43005 AC105036.2-201ENST00000569468 176 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms