Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 NOC2LP1-202ENST00000452600 2235 ntBASIC13.67□□□□□ -0.22
RPL13AP40429 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL13AP40429 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.67□□□□□ -0.22
RPL13AP40429 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.67□□□□□ -0.22
RPL13AP40429 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.67□□□□□ -0.22
RPL13AP40429 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL13AP40429 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.67□□□□□ -0.22
RPL13AP40429 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RPL13AP40429 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.67□□□□□ -0.22
RPL13AP40429 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RPL13AP40429 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
RPL13AP40429 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPL13AP40429 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RPL13AP40429 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
RPL13AP40429 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL13AP40429 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 AC121338.2-201ENST00000622535 1744 ntBASIC13.66□□□□□ -0.22
RPL13AP40429 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.66□□□□□ -0.22
RPL13AP40429 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPL13AP40429 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
RPL13AP40429 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RPL13AP40429 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPL13AP40429 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
RPL13AP40429 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
RPL13AP40429 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPL13AP40429 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RPL13AP40429 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC13.65□□□□□ -0.22
RPL13AP40429 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC13.65□□□□□ -0.22
RPL13AP40429 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC13.65□□□□□ -0.22
RPL13AP40429 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 MIR3621-201ENST00000580529 85 ntBASIC13.65□□□□□ -0.22
RPL13AP40429 AL117332.1-201ENST00000622628 974 ntBASIC13.65□□□□□ -0.22
RPL13AP40429 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.65□□□□□ -0.22
RPL13AP40429 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPL13AP40429 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
RPL13AP40429 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RPL13AP40429 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPL13AP40429 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
RPL13AP40429 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPL13AP40429 AC005703.6-201ENST00000623265 1329 ntBASIC13.64□□□□□ -0.23
RPL13AP40429 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPL13AP40429 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 AL032819.2-201ENST00000624543 2162 ntBASIC13.64□□□□□ -0.23
RPL13AP40429 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPL13AP40429 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.64□□□□□ -0.23
RPL13AP40429 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC13.64□□□□□ -0.23
RPL13AP40429 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.64□□□□□ -0.23
RPL13AP40429 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.64□□□□□ -0.23
RPL13AP40429 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms