Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CTNNA1P35221 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CTNNA1P35221 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.87■□□□□ 0.93
CTNNA1P35221 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CTNNA1P35221 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.87■□□□□ 0.93
CTNNA1P35221 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.87■□□□□ 0.93
CTNNA1P35221 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CTNNA1P35221 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.87■□□□□ 0.93
CTNNA1P35221 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTNNA1P35221 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CTNNA1P35221 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.86■□□□□ 0.93
CTNNA1P35221 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNNA1P35221 AC006015.1-201ENST00000429970 570 ntBASIC20.86■□□□□ 0.93
CTNNA1P35221 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNNA1P35221 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNNA1P35221 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 AC005332.7-201ENST00000614046 2005 ntBASIC20.86■□□□□ 0.93
CTNNA1P35221 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNNA1P35221 AC093484.2-201ENST00000580996 2166 ntBASIC20.86■□□□□ 0.93
CTNNA1P35221 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.86■□□□□ 0.93
CTNNA1P35221 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CTNNA1P35221 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTNNA1P35221 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 KRT18P68-201ENST00000392293 1000 ntBASIC20.85■□□□□ 0.93
CTNNA1P35221 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.85■□□□□ 0.93
CTNNA1P35221 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.85■□□□□ 0.93
CTNNA1P35221 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.85■□□□□ 0.93
CTNNA1P35221 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.85■□□□□ 0.93
CTNNA1P35221 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 KRT8P20-201ENST00000423953 1409 ntBASIC20.85■□□□□ 0.93
CTNNA1P35221 KRT16P6-202ENST00000425692 1426 ntBASIC20.85■□□□□ 0.93
CTNNA1P35221 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.85■□□□□ 0.93
CTNNA1P35221 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNNA1P35221 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CTNNA1P35221 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 AC016769.1-201ENST00000409132 1010 ntBASIC20.84■□□□□ 0.93
CTNNA1P35221 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.84■□□□□ 0.93
CTNNA1P35221 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.84■□□□□ 0.93
CTNNA1P35221 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.84■□□□□ 0.93
CTNNA1P35221 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 AC011767.1-201ENST00000617410 1153 ntBASIC20.84■□□□□ 0.93
CTNNA1P35221 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNNA1P35221 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNNA1P35221 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CTNNA1P35221 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.83■□□□□ 0.93
CTNNA1P35221 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CTNNA1P35221 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.83■□□□□ 0.93
CTNNA1P35221 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNNA1P35221 CYP2T1P-201ENST00000432607 1285 ntBASIC20.83■□□□□ 0.93
CTNNA1P35221 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms