Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHMP24386 AC091874.3-201ENST00000512672 1195 ntBASIC18.48■□□□□ 0.55
CHMP24386 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP24386 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.48■□□□□ 0.55
CHMP24386 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.48■□□□□ 0.55
CHMP24386 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CHMP24386 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.48■□□□□ 0.55
CHMP24386 KRT17P1-201ENST00000399211 1546 ntBASIC18.48■□□□□ 0.55
CHMP24386 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHMP24386 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 DUSP5P2-201ENST00000426873 1033 ntBASIC18.47■□□□□ 0.55
CHMP24386 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHMP24386 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP24386 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.47■□□□□ 0.55
CHMP24386 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHMP24386 MYC-209ENST00000641252 345 ntBASIC18.47■□□□□ 0.55
CHMP24386 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.47■□□□□ 0.55
CHMP24386 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHMP24386 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHMP24386 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHMP24386 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.46■□□□□ 0.55
CHMP24386 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.46■□□□□ 0.55
CHMP24386 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP24386 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.46■□□□□ 0.55
CHMP24386 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHMP24386 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHMP24386 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.46■□□□□ 0.55
CHMP24386 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP24386 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.54
CHMP24386 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.46■□□□□ 0.54
CHMP24386 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CHMP24386 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CHMP24386 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CHMP24386 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.45■□□□□ 0.54
CHMP24386 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.45■□□□□ 0.54
CHMP24386 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.45■□□□□ 0.54
CHMP24386 AC105020.6-201ENST00000621523 1217 ntBASIC18.45■□□□□ 0.54
CHMP24386 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHMP24386 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.45■□□□□ 0.54
CHMP24386 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHMP24386 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.44■□□□□ 0.54
CHMP24386 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
CHMP24386 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
CHMP24386 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CHMP24386 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms