Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP11P24347 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP11P24347 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP11P24347 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MMP11P24347 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
MMP11P24347 AC239809.2-201ENST00000415381 517 ntBASIC18.82■□□□□ 0.6
MMP11P24347 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP11P24347 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP11P24347 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.82■□□□□ 0.6
MMP11P24347 AC124016.1-201ENST00000609552 612 ntBASIC18.82■□□□□ 0.6
MMP11P24347 AL023875.1-201ENST00000640777 796 ntBASIC18.82■□□□□ 0.6
MMP11P24347 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MMP11P24347 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.82■□□□□ 0.6
MMP11P24347 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP11P24347 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
MMP11P24347 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MMP11P24347 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MMP11P24347 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MMP11P24347 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.81■□□□□ 0.6
MMP11P24347 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.81■□□□□ 0.6
MMP11P24347 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MMP11P24347 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
MMP11P24347 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MMP11P24347 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.8■□□□□ 0.6
MMP11P24347 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
MMP11P24347 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MMP11P24347 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
MMP11P24347 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MMP11P24347 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.8■□□□□ 0.6
MMP11P24347 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.8■□□□□ 0.6
MMP11P24347 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
MMP11P24347 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MMP11P24347 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.8■□□□□ 0.6
MMP11P24347 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MMP11P24347 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.79■□□□□ 0.6
MMP11P24347 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MMP11P24347 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MMP11P24347 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.79■□□□□ 0.6
MMP11P24347 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP11P24347 Z99916.2-201ENST00000604037 246 ntBASIC18.79■□□□□ 0.6
MMP11P24347 AC110285.5-201ENST00000611501 352 ntBASIC18.79■□□□□ 0.6
MMP11P24347 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
MMP11P24347 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.79■□□□□ 0.6
MMP11P24347 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MMP11P24347 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.79■□□□□ 0.6
MMP11P24347 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP11P24347 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP11P24347 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MMP11P24347 AC099778.1-201ENST00000568593 1911 ntBASIC18.78■□□□□ 0.6
MMP11P24347 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP11P24347 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP11P24347 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
MMP11P24347 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
MMP11P24347 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MMP11P24347 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.78■□□□□ 0.6
MMP11P24347 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.78■□□□□ 0.6
MMP11P24347 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MMP11P24347 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms