Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
XPAP23025 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.97■□□□□ 0.79
XPAP23025 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.97■□□□□ 0.79
XPAP23025 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.97■□□□□ 0.79
XPAP23025 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.97■□□□□ 0.79
XPAP23025 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.97■□□□□ 0.79
XPAP23025 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.97■□□□□ 0.79
XPAP23025 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
XPAP23025 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.97■□□□□ 0.79
XPAP23025 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 FEM1AP1-201ENST00000431297 1995 ntBASIC19.96■□□□□ 0.79
XPAP23025 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.96■□□□□ 0.79
XPAP23025 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.96■□□□□ 0.79
XPAP23025 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.96■□□□□ 0.79
XPAP23025 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
XPAP23025 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.96■□□□□ 0.79
XPAP23025 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.96■□□□□ 0.79
XPAP23025 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
XPAP23025 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
XPAP23025 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
XPAP23025 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
XPAP23025 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
XPAP23025 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
XPAP23025 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.95■□□□□ 0.78
XPAP23025 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.95■□□□□ 0.78
XPAP23025 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.95■□□□□ 0.78
XPAP23025 AC093827.2-201ENST00000512654 315 ntBASIC19.95■□□□□ 0.78
XPAP23025 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.95■□□□□ 0.78
XPAP23025 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.95■□□□□ 0.78
XPAP23025 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
XPAP23025 AC124016.1-201ENST00000609552 612 ntBASIC19.95■□□□□ 0.78
XPAP23025 AC110285.5-201ENST00000611501 352 ntBASIC19.95■□□□□ 0.78
XPAP23025 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.95■□□□□ 0.78
XPAP23025 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
XPAP23025 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
XPAP23025 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
XPAP23025 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
XPAP23025 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 AP005212.1-201ENST00000581547 1997 ntBASIC19.94■□□□□ 0.78
XPAP23025 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.94■□□□□ 0.78
XPAP23025 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
XPAP23025 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.94■□□□□ 0.78
XPAP23025 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.94■□□□□ 0.78
XPAP23025 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
XPAP23025 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
XPAP23025 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
XPAP23025 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.93■□□□□ 0.78
XPAP23025 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.93■□□□□ 0.78
XPAP23025 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
XPAP23025 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms