Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRCC1P18887 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.72■□□□□ 0.75
XRCC1P18887 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
XRCC1P18887 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.72■□□□□ 0.75
XRCC1P18887 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
XRCC1P18887 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
XRCC1P18887 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.72■□□□□ 0.75
XRCC1P18887 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
XRCC1P18887 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.72■□□□□ 0.75
XRCC1P18887 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.72■□□□□ 0.75
XRCC1P18887 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
XRCC1P18887 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
XRCC1P18887 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRCC1P18887 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
XRCC1P18887 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 PRORSD1P-201ENST00000295112 541 ntBASIC19.71■□□□□ 0.75
XRCC1P18887 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 AC128676.1-201ENST00000454392 318 ntBASIC19.71■□□□□ 0.75
XRCC1P18887 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.71■□□□□ 0.75
XRCC1P18887 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
XRCC1P18887 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
XRCC1P18887 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.71■□□□□ 0.75
XRCC1P18887 AC116562.4-201ENST00000641316 2276 ntBASIC19.71■□□□□ 0.75
XRCC1P18887 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
XRCC1P18887 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.7■□□□□ 0.74
XRCC1P18887 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.7■□□□□ 0.74
XRCC1P18887 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
XRCC1P18887 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
XRCC1P18887 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
XRCC1P18887 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
XRCC1P18887 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
XRCC1P18887 AC018445.3-201ENST00000624177 1945 ntBASIC19.69■□□□□ 0.74
XRCC1P18887 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
XRCC1P18887 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.69■□□□□ 0.74
XRCC1P18887 SOX15-203ENST00000570788 1093 ntBASIC19.69■□□□□ 0.74
XRCC1P18887 AC005829.2-201ENST00000571422 1056 ntBASIC19.69■□□□□ 0.74
XRCC1P18887 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRCC1P18887 AC098818.2-201ENST00000564925 2320 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms