Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
UBL4AP11441 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
UBL4AP11441 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UBL4AP11441 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.29■□□□□ 0.52
UBL4AP11441 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
UBL4AP11441 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.29■□□□□ 0.52
UBL4AP11441 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
UBL4AP11441 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.29■□□□□ 0.52
UBL4AP11441 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.29■□□□□ 0.52
UBL4AP11441 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.29■□□□□ 0.52
UBL4AP11441 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.29■□□□□ 0.52
UBL4AP11441 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.29■□□□□ 0.52
UBL4AP11441 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
UBL4AP11441 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.29■□□□□ 0.52
UBL4AP11441 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.29■□□□□ 0.52
UBL4AP11441 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
UBL4AP11441 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBL4AP11441 AL691432.2-201ENST00000607222 2038 ntBASIC18.28■□□□□ 0.52
UBL4AP11441 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.28■□□□□ 0.52
UBL4AP11441 AC097658.1-201ENST00000475555 843 ntBASIC18.28■□□□□ 0.52
UBL4AP11441 AC098934.4-201ENST00000564127 592 ntBASIC18.28■□□□□ 0.52
UBL4AP11441 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.28■□□□□ 0.52
UBL4AP11441 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
UBL4AP11441 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBL4AP11441 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UBL4AP11441 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
UBL4AP11441 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.27■□□□□ 0.52
UBL4AP11441 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBL4AP11441 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBL4AP11441 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBL4AP11441 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.27■□□□□ 0.51
UBL4AP11441 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.27■□□□□ 0.51
UBL4AP11441 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.27■□□□□ 0.51
UBL4AP11441 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
UBL4AP11441 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.27■□□□□ 0.51
UBL4AP11441 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL4AP11441 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.26■□□□□ 0.51
UBL4AP11441 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
UBL4AP11441 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 HLA-L-209ENST00000420110 1011 ntBASIC18.26■□□□□ 0.51
UBL4AP11441 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.26■□□□□ 0.51
UBL4AP11441 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.26■□□□□ 0.51
UBL4AP11441 MYC-209ENST00000641252 345 ntBASIC18.26■□□□□ 0.51
UBL4AP11441 AC133041.1-202ENST00000642053 222 ntBASIC18.26■□□□□ 0.51
UBL4AP11441 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
UBL4AP11441 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
UBL4AP11441 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
UBL4AP11441 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.26■□□□□ 0.51
UBL4AP11441 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.26■□□□□ 0.51
UBL4AP11441 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
UBL4AP11441 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.26■□□□□ 0.51
UBL4AP11441 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms