Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 AC005332.7-201ENST00000614046 2005 ntBASIC20.77■□□□□ 0.92
RARAP10276 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.77■□□□□ 0.92
RARAP10276 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.77■□□□□ 0.92
RARAP10276 GPX1P1-201ENST00000388829 606 ntBASIC20.77■□□□□ 0.92
RARAP10276 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
RARAP10276 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.77■□□□□ 0.92
RARAP10276 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 AC093484.2-201ENST00000580996 2166 ntBASIC20.77■□□□□ 0.92
RARAP10276 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.77■□□□□ 0.92
RARAP10276 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RARAP10276 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RARAP10276 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RARAP10276 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RARAP10276 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RARAP10276 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
RARAP10276 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RARAP10276 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RARAP10276 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.76■□□□□ 0.91
RARAP10276 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RARAP10276 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.76■□□□□ 0.91
RARAP10276 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.76■□□□□ 0.91
RARAP10276 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.76■□□□□ 0.91
RARAP10276 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.76■□□□□ 0.91
RARAP10276 AC023632.3-201ENST00000521633 145 ntBASIC20.76■□□□□ 0.91
RARAP10276 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RARAP10276 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.76■□□□□ 0.91
RARAP10276 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.76■□□□□ 0.91
RARAP10276 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RARAP10276 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.76■□□□□ 0.91
RARAP10276 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RARAP10276 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RARAP10276 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.75■□□□□ 0.91
RARAP10276 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.75■□□□□ 0.91
RARAP10276 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.75■□□□□ 0.91
RARAP10276 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RARAP10276 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RARAP10276 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.75■□□□□ 0.91
RARAP10276 TSPY6P-201ENST00000448518 926 ntBASIC20.75■□□□□ 0.91
RARAP10276 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.75■□□□□ 0.91
RARAP10276 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.75■□□□□ 0.91
RARAP10276 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.75■□□□□ 0.91
RARAP10276 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
RARAP10276 KRT16P6-202ENST00000425692 1426 ntBASIC20.75■□□□□ 0.91
RARAP10276 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
RARAP10276 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RARAP10276 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RARAP10276 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.75■□□□□ 0.91
RARAP10276 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 BX323043.1-201ENST00000641006 1765 ntBASIC20.74■□□□□ 0.91
RARAP10276 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.74■□□□□ 0.91
RARAP10276 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.74■□□□□ 0.91
RARAP10276 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 HLA-G-202ENST00000376815 851 ntBASIC20.74■□□□□ 0.91
RARAP10276 HLA-G-203ENST00000376818 1127 ntBASIC20.74■□□□□ 0.91
RARAP10276 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RARAP10276 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.74■□□□□ 0.91
RARAP10276 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.74■□□□□ 0.91
RARAP10276 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.74■□□□□ 0.91
RARAP10276 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RARAP10276 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.74■□□□□ 0.91
RARAP10276 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARAP10276 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.73■□□□□ 0.91
RARAP10276 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RARAP10276 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARAP10276 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms