Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TPM3P06753 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC22.17■■□□□ 1.14
TPM3P06753 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.17■■□□□ 1.14
TPM3P06753 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.17■■□□□ 1.14
TPM3P06753 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.17■■□□□ 1.14
TPM3P06753 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TPM3P06753 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TPM3P06753 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.16■■□□□ 1.14
TPM3P06753 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
TPM3P06753 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
TPM3P06753 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.16■■□□□ 1.14
TPM3P06753 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.16■■□□□ 1.14
TPM3P06753 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.16■■□□□ 1.14
TPM3P06753 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.16■■□□□ 1.14
TPM3P06753 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.16■■□□□ 1.14
TPM3P06753 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TPM3P06753 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TPM3P06753 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TPM3P06753 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.15■■□□□ 1.14
TPM3P06753 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
TPM3P06753 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
TPM3P06753 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC22.15■■□□□ 1.14
TPM3P06753 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.15■■□□□ 1.14
TPM3P06753 AC007322.3-201ENST00000426526 701 ntBASIC22.15■■□□□ 1.14
TPM3P06753 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC22.15■■□□□ 1.14
TPM3P06753 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 AL136967.2-201ENST00000623968 743 ntBASIC22.15■■□□□ 1.14
TPM3P06753 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
TPM3P06753 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TPM3P06753 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TPM3P06753 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TPM3P06753 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
TPM3P06753 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.15■■□□□ 1.14
TPM3P06753 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.14■■□□□ 1.14
TPM3P06753 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
TPM3P06753 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TPM3P06753 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
TPM3P06753 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TPM3P06753 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TPM3P06753 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TPM3P06753 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.14■■□□□ 1.13
TPM3P06753 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.14■■□□□ 1.13
TPM3P06753 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
TPM3P06753 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC22.14■■□□□ 1.13
TPM3P06753 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TPM3P06753 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TPM3P06753 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.14■■□□□ 1.13
TPM3P06753 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC22.14■■□□□ 1.13
TPM3P06753 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TPM3P06753 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPM3P06753 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TPM3P06753 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPM3P06753 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPM3P06753 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
TPM3P06753 IRS3P-201ENST00000223076 1006 ntBASIC22.13■■□□□ 1.13
TPM3P06753 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.13■■□□□ 1.13
TPM3P06753 CCDC92B-201ENST00000575506 885 ntBASIC22.13■■□□□ 1.13
TPM3P06753 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TPM3P06753 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
TPM3P06753 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPM3P06753 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
TPM3P06753 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TPM3P06753 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.13■■□□□ 1.13
TPM3P06753 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC22.13■■□□□ 1.13
TPM3P06753 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TPM3P06753 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.12■■□□□ 1.13
TPM3P06753 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
TPM3P06753 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.12■■□□□ 1.13
TPM3P06753 AC105265.2-201ENST00000467189 838 ntBASIC22.12■■□□□ 1.13
TPM3P06753 KRT18P20-201ENST00000548986 1279 ntBASIC22.12■■□□□ 1.13
TPM3P06753 SLC7A5P2-201ENST00000553010 536 ntBASIC22.12■■□□□ 1.13
TPM3P06753 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms