Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 AC008403.3-201ENST00000598924 454 ntBASIC20.11■□□□□ 0.81
HLA-DQB2P05538 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HLA-DQB2P05538 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.1■□□□□ 0.81
HLA-DQB2P05538 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HLA-DQB2P05538 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.08■□□□□ 0.81
HLA-DQB2P05538 AP003097.1-201ENST00000530657 1135 ntBASIC20.08■□□□□ 0.81
HLA-DQB2P05538 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.08■□□□□ 0.8
HLA-DQB2P05538 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
HLA-DQB2P05538 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQB2P05538 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.08■□□□□ 0.8
HLA-DQB2P05538 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
HLA-DQB2P05538 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
HLA-DQB2P05538 TFP1-202ENST00000475455 1573 ntBASIC20.08■□□□□ 0.8
HLA-DQB2P05538 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms