Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV3P03979 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC15.58■□□□□ 0.08
TRGV3P03979 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.58■□□□□ 0.08
TRGV3P03979 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRGV3P03979 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV3P03979 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
TRGV3P03979 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.57■□□□□ 0.08
TRGV3P03979 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.57■□□□□ 0.08
TRGV3P03979 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.57■□□□□ 0.08
TRGV3P03979 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
TRGV3P03979 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.57■□□□□ 0.08
TRGV3P03979 BX119927.1-201ENST00000636596 1552 ntBASIC15.57■□□□□ 0.08
TRGV3P03979 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV3P03979 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.57■□□□□ 0.08
TRGV3P03979 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TRGV3P03979 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRGV3P03979 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRGV3P03979 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV3P03979 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.56■□□□□ 0.08
TRGV3P03979 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRGV3P03979 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV3P03979 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRGV3P03979 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.56■□□□□ 0.08
TRGV3P03979 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 AC099778.1-201ENST00000568593 1911 ntBASIC15.56■□□□□ 0.08
TRGV3P03979 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.56■□□□□ 0.08
TRGV3P03979 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TRGV3P03979 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRGV3P03979 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRGV3P03979 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRGV3P03979 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV3P03979 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV3P03979 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRGV3P03979 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV3P03979 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRGV3P03979 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV3P03979 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.55■□□□□ 0.08
TRGV3P03979 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.55■□□□□ 0.08
TRGV3P03979 UNC93B5-201ENST00000530315 699 ntBASIC15.55■□□□□ 0.08
TRGV3P03979 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.55■□□□□ 0.08
TRGV3P03979 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.55■□□□□ 0.08
TRGV3P03979 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TRGV3P03979 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.55■□□□□ 0.08
TRGV3P03979 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRGV3P03979 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.55■□□□□ 0.08
TRGV3P03979 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TRGV3P03979 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRGV3P03979 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRGV3P03979 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms