Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC020907.5-201ENST00000624372 1936 ntBASIC23.96■■□□□ 1.43
COL1A1P02452 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.96■■□□□ 1.43
COL1A1P02452 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC23.96■■□□□ 1.43
COL1A1P02452 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
COL1A1P02452 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
COL1A1P02452 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
COL1A1P02452 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.95■■□□□ 1.42
COL1A1P02452 UNC93B2-201ENST00000285383 730 ntBASIC23.95■■□□□ 1.42
COL1A1P02452 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.95■■□□□ 1.42
COL1A1P02452 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 AC113347.1-201ENST00000413321 391 ntBASIC23.95■■□□□ 1.42
COL1A1P02452 AP002982.1-201ENST00000492365 877 ntBASIC23.95■■□□□ 1.42
COL1A1P02452 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
COL1A1P02452 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
COL1A1P02452 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.95■■□□□ 1.42
COL1A1P02452 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
COL1A1P02452 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC23.95■■□□□ 1.42
COL1A1P02452 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC23.95■■□□□ 1.42
COL1A1P02452 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 KRT18P16-201ENST00000510337 1294 ntBASIC23.94■■□□□ 1.42
COL1A1P02452 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.94■■□□□ 1.42
COL1A1P02452 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
COL1A1P02452 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 AC079598.2-202ENST00000546624 1451 ntBASIC23.94■■□□□ 1.42
COL1A1P02452 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
COL1A1P02452 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.94■■□□□ 1.42
COL1A1P02452 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.94■■□□□ 1.42
COL1A1P02452 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.94■■□□□ 1.42
COL1A1P02452 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
COL1A1P02452 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.94■■□□□ 1.42
COL1A1P02452 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.93■■□□□ 1.42
COL1A1P02452 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
COL1A1P02452 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
COL1A1P02452 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
COL1A1P02452 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.93■■□□□ 1.42
COL1A1P02452 AL049597.2-201ENST00000565575 961 ntBASIC23.93■■□□□ 1.42
COL1A1P02452 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC23.93■■□□□ 1.42
COL1A1P02452 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.93■■□□□ 1.42
COL1A1P02452 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.93■■□□□ 1.42
COL1A1P02452 AL512408.1-201ENST00000569378 2000 ntBASIC23.93■■□□□ 1.42
COL1A1P02452 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.92■■□□□ 1.42
COL1A1P02452 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A1P02452 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.92■■□□□ 1.42
COL1A1P02452 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A1P02452 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A1P02452 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
COL1A1P02452 MESTP1-201ENST00000404287 994 ntBASIC23.92■■□□□ 1.42
COL1A1P02452 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A1P02452 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC23.92■■□□□ 1.42
COL1A1P02452 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.92■■□□□ 1.42
COL1A1P02452 AP000525.1-201ENST00000608286 694 ntBASIC23.92■■□□□ 1.42
COL1A1P02452 AC005363.2-201ENST00000618631 242 ntBASIC23.92■■□□□ 1.42
COL1A1P02452 AL590326.2-201ENST00000625139 305 ntBASIC23.92■■□□□ 1.42
COL1A1P02452 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A1P02452 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.92■■□□□ 1.42
COL1A1P02452 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.92■■□□□ 1.42
COL1A1P02452 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
COL1A1P02452 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A1P02452 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
COL1A1P02452 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A1P02452 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
COL1A1P02452 KRT16P1-201ENST00000399124 1418 ntBASIC23.91■■□□□ 1.42
COL1A1P02452 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC23.91■■□□□ 1.42
COL1A1P02452 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A1P02452 MOK-225ENST00000522867 1883 ntTSL 5 BASIC23.91■■□□□ 1.42
COL1A1P02452 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.91■■□□□ 1.42
COL1A1P02452 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC23.91■■□□□ 1.42
COL1A1P02452 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A1P02452 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
COL1A1P02452 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC23.91■■□□□ 1.42
COL1A1P02452 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
COL1A1P02452 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms