Protein–RNA interactions for Protein: P00736

C1R, Complement C1r subcomponent, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1RP00736 AC010947.1-201ENST00000623454 693 ntBASIC20.9■□□□□ 0.94
C1RP00736 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
C1RP00736 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C1RP00736 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C1RP00736 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C1RP00736 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
C1RP00736 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
C1RP00736 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.89■□□□□ 0.93
C1RP00736 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
C1RP00736 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.89■□□□□ 0.93
C1RP00736 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.89■□□□□ 0.93
C1RP00736 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.89■□□□□ 0.93
C1RP00736 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
C1RP00736 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.89■□□□□ 0.93
C1RP00736 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
C1RP00736 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
C1RP00736 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.93
C1RP00736 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
C1RP00736 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.88■□□□□ 0.93
C1RP00736 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 AC073508.3-201ENST00000619697 1419 ntBASIC20.88■□□□□ 0.93
C1RP00736 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
C1RP00736 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
C1RP00736 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
C1RP00736 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
C1RP00736 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.88■□□□□ 0.93
C1RP00736 KRT18P16-201ENST00000510337 1294 ntBASIC20.88■□□□□ 0.93
C1RP00736 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.88■□□□□ 0.93
C1RP00736 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 AL445228.2-201ENST00000605589 952 ntBASIC20.88■□□□□ 0.93
C1RP00736 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
C1RP00736 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.88■□□□□ 0.93
C1RP00736 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.88■□□□□ 0.93
C1RP00736 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.87■□□□□ 0.93
C1RP00736 KRT16P6-202ENST00000425692 1426 ntBASIC20.87■□□□□ 0.93
C1RP00736 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.87■□□□□ 0.93
C1RP00736 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.87■□□□□ 0.93
C1RP00736 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C1RP00736 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C1RP00736 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.87■□□□□ 0.93
C1RP00736 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
C1RP00736 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.87■□□□□ 0.93
C1RP00736 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.87■□□□□ 0.93
C1RP00736 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.87■□□□□ 0.93
C1RP00736 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.87■□□□□ 0.93
C1RP00736 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.87■□□□□ 0.93
C1RP00736 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C1RP00736 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.87■□□□□ 0.93
C1RP00736 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
C1RP00736 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
C1RP00736 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
C1RP00736 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
C1RP00736 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
C1RP00736 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C1RP00736 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.86■□□□□ 0.93
C1RP00736 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
C1RP00736 AC005521.1-201ENST00000393351 872 ntBASIC20.86■□□□□ 0.93
C1RP00736 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.86■□□□□ 0.93
C1RP00736 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C1RP00736 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.86■□□□□ 0.93
C1RP00736 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C1RP00736 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.86■□□□□ 0.93
C1RP00736 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.86■□□□□ 0.93
C1RP00736 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.86■□□□□ 0.93
C1RP00736 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.86■□□□□ 0.93
C1RP00736 AL049597.2-201ENST00000565575 961 ntBASIC20.86■□□□□ 0.93
C1RP00736 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.86■□□□□ 0.93
C1RP00736 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
C1RP00736 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
C1RP00736 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.85■□□□□ 0.93
C1RP00736 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
C1RP00736 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.85■□□□□ 0.93
C1RP00736 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
C1RP00736 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 MESTP1-201ENST00000404287 994 ntBASIC20.85■□□□□ 0.93
C1RP00736 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.85■□□□□ 0.93
C1RP00736 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.85■□□□□ 0.93
C1RP00736 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
C1RP00736 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.85■□□□□ 0.93
C1RP00736 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.85■□□□□ 0.93
C1RP00736 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms