Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 AC104076.2-201ENST00000448912 469 ntBASIC21.27■■□□□ 1
CSPG5O95196 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.27■■□□□ 1
CSPG5O95196 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.27■■□□□ 1
CSPG5O95196 KRT16P1-201ENST00000399124 1418 ntBASIC21.27■■□□□ 1
CSPG5O95196 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.27■■□□□ 1
CSPG5O95196 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSPG5O95196 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.27■□□□□ 0.99
CSPG5O95196 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
CSPG5O95196 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CSPG5O95196 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
CSPG5O95196 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.26■□□□□ 0.99
CSPG5O95196 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.26■□□□□ 0.99
CSPG5O95196 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.26■□□□□ 0.99
CSPG5O95196 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.26■□□□□ 0.99
CSPG5O95196 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.26■□□□□ 0.99
CSPG5O95196 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CSPG5O95196 FITM1-202ENST00000559294 800 ntBASIC21.26■□□□□ 0.99
CSPG5O95196 WWOX-216ENST00000569818 525 ntBASIC21.26■□□□□ 0.99
CSPG5O95196 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSPG5O95196 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.25■□□□□ 0.99
CSPG5O95196 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.25■□□□□ 0.99
CSPG5O95196 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 NIFKP9-201ENST00000419265 221 ntBASIC21.25■□□□□ 0.99
CSPG5O95196 ATP5G1P1-201ENST00000448724 379 ntBASIC21.25■□□□□ 0.99
CSPG5O95196 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.25■□□□□ 0.99
CSPG5O95196 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.25■□□□□ 0.99
CSPG5O95196 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.25■□□□□ 0.99
CSPG5O95196 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.25■□□□□ 0.99
CSPG5O95196 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSPG5O95196 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.24■□□□□ 0.99
CSPG5O95196 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CSPG5O95196 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CSPG5O95196 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CSPG5O95196 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.24■□□□□ 0.99
CSPG5O95196 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.24■□□□□ 0.99
CSPG5O95196 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.24■□□□□ 0.99
CSPG5O95196 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.24■□□□□ 0.99
CSPG5O95196 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.24■□□□□ 0.99
CSPG5O95196 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.24■□□□□ 0.99
CSPG5O95196 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.24■□□□□ 0.99
CSPG5O95196 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSPG5O95196 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.23■□□□□ 0.99
CSPG5O95196 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.23■□□□□ 0.99
CSPG5O95196 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 LIN28AP1-201ENST00000429574 405 ntBASIC21.23■□□□□ 0.99
CSPG5O95196 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CSPG5O95196 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.23■□□□□ 0.99
CSPG5O95196 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.23■□□□□ 0.99
CSPG5O95196 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.23■□□□□ 0.99
CSPG5O95196 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 Z98882.1-201ENST00000622160 2253 ntBASIC21.23■□□□□ 0.99
CSPG5O95196 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
CSPG5O95196 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSPG5O95196 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms