Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC26.42■■□□□ 1.82
LTN1O94822 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
LTN1O94822 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.42■■□□□ 1.82
LTN1O94822 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LTN1O94822 TSPY14P-201ENST00000303979 915 ntBASIC26.42■■□□□ 1.82
LTN1O94822 HIST1H2APS4-201ENST00000362070 348 ntBASIC26.42■■□□□ 1.82
LTN1O94822 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LTN1O94822 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC26.42■■□□□ 1.82
LTN1O94822 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LTN1O94822 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 AC096733.2-201ENST00000609937 1394 ntBASIC26.42■■□□□ 1.82
LTN1O94822 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
LTN1O94822 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
LTN1O94822 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.41■■□□□ 1.82
LTN1O94822 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC26.41■■□□□ 1.82
LTN1O94822 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.41■■□□□ 1.82
LTN1O94822 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC26.41■■□□□ 1.82
LTN1O94822 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
LTN1O94822 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.41■■□□□ 1.82
LTN1O94822 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
LTN1O94822 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.41■■□□□ 1.82
LTN1O94822 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.41■■□□□ 1.82
LTN1O94822 BX119927.1-201ENST00000636596 1552 ntBASIC26.41■■□□□ 1.82
LTN1O94822 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LTN1O94822 HLA-A-209ENST00000638375 975 ntBASIC26.41■■□□□ 1.82
LTN1O94822 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.4■■□□□ 1.82
LTN1O94822 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
LTN1O94822 KRT16P6-202ENST00000425692 1426 ntBASIC26.4■■□□□ 1.82
LTN1O94822 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 INGX-201ENST00000359239 846 ntBASIC26.4■■□□□ 1.82
LTN1O94822 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
LTN1O94822 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC26.4■■□□□ 1.82
LTN1O94822 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC26.4■■□□□ 1.82
LTN1O94822 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.4■■□□□ 1.82
LTN1O94822 MYC-208ENST00000641036 567 ntBASIC26.4■■□□□ 1.82
LTN1O94822 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.4■■□□□ 1.82
LTN1O94822 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LTN1O94822 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LTN1O94822 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.39■■□□□ 1.82
LTN1O94822 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC26.39■■□□□ 1.82
LTN1O94822 AC128688.1-201ENST00000487626 519 ntBASIC26.39■■□□□ 1.82
LTN1O94822 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
LTN1O94822 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.39■■□□□ 1.82
LTN1O94822 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC26.39■■□□□ 1.82
LTN1O94822 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LTN1O94822 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
LTN1O94822 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC26.39■■□□□ 1.81
LTN1O94822 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC26.38■■□□□ 1.81
LTN1O94822 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 AL137013.1-201ENST00000432946 1228 ntBASIC26.38■■□□□ 1.81
LTN1O94822 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.38■■□□□ 1.81
LTN1O94822 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.38■■□□□ 1.81
LTN1O94822 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.38■■□□□ 1.81
LTN1O94822 GRAMD4P8-201ENST00000605465 1115 ntBASIC26.38■■□□□ 1.81
LTN1O94822 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC26.38■■□□□ 1.81
LTN1O94822 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.38■■□□□ 1.81
LTN1O94822 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
LTN1O94822 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LTN1O94822 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
LTN1O94822 AC104076.2-201ENST00000448912 469 ntBASIC26.38■■□□□ 1.81
LTN1O94822 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.37■■□□□ 1.81
LTN1O94822 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LTN1O94822 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LTN1O94822 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
LTN1O94822 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC26.37■■□□□ 1.81
LTN1O94822 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LTN1O94822 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.36■■□□□ 1.81
LTN1O94822 CRYGFP-201ENST00000418459 633 ntBASIC26.36■■□□□ 1.81
LTN1O94822 PTPA-216ENST00000432651 857 ntTSL 2 BASIC26.36■■□□□ 1.81
LTN1O94822 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 AC131212.4-201ENST00000623606 975 ntBASIC26.36■■□□□ 1.81
LTN1O94822 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.36■■□□□ 1.81
LTN1O94822 TMEM179-206ENST00000616017 1645 ntBASIC26.36■■□□□ 1.81
LTN1O94822 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms