Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 AFG3L1P-217ENST00000557444 2447 ntBASIC18.97■□□□□ 0.63
LCMT2O60294 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.97■□□□□ 0.63
LCMT2O60294 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LCMT2O60294 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
LCMT2O60294 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.97■□□□□ 0.63
LCMT2O60294 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LCMT2O60294 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.97■□□□□ 0.63
LCMT2O60294 AC018553.1-201ENST00000616682 1458 ntBASIC18.97■□□□□ 0.63
LCMT2O60294 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.96■□□□□ 0.63
LCMT2O60294 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.96■□□□□ 0.63
LCMT2O60294 POU5F1P3-201ENST00000428824 1078 ntBASIC18.96■□□□□ 0.63
LCMT2O60294 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.96■□□□□ 0.63
LCMT2O60294 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 AC233263.1-201ENST00000578059 224 ntBASIC18.96■□□□□ 0.63
LCMT2O60294 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.96■□□□□ 0.63
LCMT2O60294 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LCMT2O60294 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.96■□□□□ 0.63
LCMT2O60294 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LCMT2O60294 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.95■□□□□ 0.62
LCMT2O60294 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 AC116351.2-201ENST00000606540 1585 ntBASIC18.95■□□□□ 0.62
LCMT2O60294 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LCMT2O60294 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.95■□□□□ 0.62
LCMT2O60294 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LCMT2O60294 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LCMT2O60294 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.95■□□□□ 0.62
LCMT2O60294 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.94■□□□□ 0.62
LCMT2O60294 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.94■□□□□ 0.62
LCMT2O60294 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 KRT17P3-201ENST00000420566 1262 ntBASIC18.94■□□□□ 0.62
LCMT2O60294 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.94■□□□□ 0.62
LCMT2O60294 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.94■□□□□ 0.62
LCMT2O60294 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LCMT2O60294 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 AC006058.3-201ENST00000606217 1069 ntBASIC18.94■□□□□ 0.62
LCMT2O60294 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.94■□□□□ 0.62
LCMT2O60294 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.94■□□□□ 0.62
LCMT2O60294 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.94■□□□□ 0.62
LCMT2O60294 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.94■□□□□ 0.62
LCMT2O60294 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LCMT2O60294 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LCMT2O60294 TFP1-202ENST00000475455 1573 ntBASIC18.93■□□□□ 0.62
LCMT2O60294 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.93■□□□□ 0.62
LCMT2O60294 TMEM179-206ENST00000616017 1645 ntBASIC18.93■□□□□ 0.62
LCMT2O60294 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LCMT2O60294 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.93■□□□□ 0.62
LCMT2O60294 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LCMT2O60294 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms