Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 AL162412.1-201ENST00000567129 965 ntBASIC18.12■□□□□ 0.49
IDH3BO43837 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 UBE2DNL-204ENST00000602536 740 ntBASIC18.12■□□□□ 0.49
IDH3BO43837 AL591742.1-201ENST00000604433 565 ntBASIC18.12■□□□□ 0.49
IDH3BO43837 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.12■□□□□ 0.49
IDH3BO43837 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
IDH3BO43837 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IDH3BO43837 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IDH3BO43837 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
IDH3BO43837 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.12■□□□□ 0.49
IDH3BO43837 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
IDH3BO43837 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IDH3BO43837 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3BO43837 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.11■□□□□ 0.49
IDH3BO43837 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.11■□□□□ 0.49
IDH3BO43837 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.11■□□□□ 0.49
IDH3BO43837 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3BO43837 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 AC087633.2-202ENST00000565166 1439 ntBASIC18.11■□□□□ 0.49
IDH3BO43837 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3BO43837 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.11■□□□□ 0.49
IDH3BO43837 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3BO43837 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3BO43837 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.1■□□□□ 0.49
IDH3BO43837 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
IDH3BO43837 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 AC020916.1-201ENST00000587762 1774 ntBASIC18.1■□□□□ 0.49
IDH3BO43837 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.1■□□□□ 0.49
IDH3BO43837 TMEM179-206ENST00000616017 1645 ntBASIC18.1■□□□□ 0.49
IDH3BO43837 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.1■□□□□ 0.49
IDH3BO43837 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.1■□□□□ 0.49
IDH3BO43837 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.1■□□□□ 0.49
IDH3BO43837 AL356652.1-201ENST00000615962 565 ntBASIC18.1■□□□□ 0.49
IDH3BO43837 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IDH3BO43837 AC116562.4-201ENST00000641316 2276 ntBASIC18.1■□□□□ 0.49
IDH3BO43837 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IDH3BO43837 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
IDH3BO43837 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.1■□□□□ 0.49
IDH3BO43837 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.1■□□□□ 0.49
IDH3BO43837 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3BO43837 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IDH3BO43837 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3BO43837 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IDH3BO43837 ZNRF2P3-201ENST00000424200 374 ntBASIC18.09■□□□□ 0.49
IDH3BO43837 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.09■□□□□ 0.49
IDH3BO43837 TERF1P5-201ENST00000477545 1207 ntBASIC18.09■□□□□ 0.49
IDH3BO43837 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.09■□□□□ 0.49
IDH3BO43837 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
IDH3BO43837 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.09■□□□□ 0.49
IDH3BO43837 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3BO43837 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3BO43837 BX119927.1-201ENST00000636596 1552 ntBASIC18.08■□□□□ 0.49
IDH3BO43837 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IDH3BO43837 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3BO43837 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.08■□□□□ 0.49
IDH3BO43837 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3BO43837 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3BO43837 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3BO43837 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.08■□□□□ 0.49
IDH3BO43837 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
IDH3BO43837 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3BO43837 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms