Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COCHO43405 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COCHO43405 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
COCHO43405 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COCHO43405 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COCHO43405 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COCHO43405 CLDN5-201ENST00000403084 2357 ntBASIC20.51■□□□□ 0.87
COCHO43405 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
COCHO43405 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COCHO43405 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COCHO43405 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.51■□□□□ 0.87
COCHO43405 YBX1P10-201ENST00000444752 975 ntBASIC20.51■□□□□ 0.87
COCHO43405 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COCHO43405 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.51■□□□□ 0.87
COCHO43405 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COCHO43405 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.51■□□□□ 0.87
COCHO43405 AC073912.3-201ENST00000624414 853 ntBASIC20.51■□□□□ 0.87
COCHO43405 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.51■□□□□ 0.87
COCHO43405 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
COCHO43405 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COCHO43405 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.51■□□□□ 0.87
COCHO43405 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.51■□□□□ 0.87
COCHO43405 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COCHO43405 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COCHO43405 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.5■□□□□ 0.87
COCHO43405 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 BX088651.1-201ENST00000540551 451 ntBASIC20.5■□□□□ 0.87
COCHO43405 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.5■□□□□ 0.87
COCHO43405 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.5■□□□□ 0.87
COCHO43405 AL355075.4-201ENST00000554988 638 ntBASIC20.5■□□□□ 0.87
COCHO43405 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.5■□□□□ 0.87
COCHO43405 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.5■□□□□ 0.87
COCHO43405 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COCHO43405 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.49■□□□□ 0.87
COCHO43405 AL162377.1-201ENST00000618844 1793 ntBASIC20.49■□□□□ 0.87
COCHO43405 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.49■□□□□ 0.87
COCHO43405 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.49■□□□□ 0.87
COCHO43405 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.49■□□□□ 0.87
COCHO43405 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 NIFKP9-201ENST00000419265 221 ntBASIC20.49■□□□□ 0.87
COCHO43405 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.49■□□□□ 0.87
COCHO43405 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.49■□□□□ 0.87
COCHO43405 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 KRT18P16-201ENST00000510337 1294 ntBASIC20.49■□□□□ 0.87
COCHO43405 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.49■□□□□ 0.87
COCHO43405 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.49■□□□□ 0.87
COCHO43405 AP003071.4-201ENST00000562276 1284 ntBASIC20.49■□□□□ 0.87
COCHO43405 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.49■□□□□ 0.87
COCHO43405 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COCHO43405 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COCHO43405 GABARAPL3-202ENST00000624044 1851 ntBASIC20.49■□□□□ 0.87
COCHO43405 PKD1P6-201ENST00000343738 4769 ntBASIC20.49■□□□□ 0.87
COCHO43405 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.49■□□□□ 0.87
COCHO43405 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COCHO43405 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 AC092667.1-201ENST00000434301 2586 ntBASIC20.48■□□□□ 0.87
COCHO43405 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
COCHO43405 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.48■□□□□ 0.87
COCHO43405 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COCHO43405 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.48■□□□□ 0.87
COCHO43405 AL355355.2-201ENST00000442321 338 ntBASIC20.48■□□□□ 0.87
COCHO43405 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.48■□□□□ 0.87
COCHO43405 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.48■□□□□ 0.87
COCHO43405 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.48■□□□□ 0.87
COCHO43405 C1QL1P1-201ENST00000568105 661 ntBASIC20.48■□□□□ 0.87
COCHO43405 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COCHO43405 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.48■□□□□ 0.87
COCHO43405 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.48■□□□□ 0.87
COCHO43405 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.48■□□□□ 0.87
COCHO43405 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.48■□□□□ 0.87
COCHO43405 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.47■□□□□ 0.87
COCHO43405 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms