Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLDN4O14493 AC128676.1-201ENST00000454392 318 ntBASIC18.66■□□□□ 0.58
CLDN4O14493 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN4O14493 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN4O14493 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN4O14493 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN4O14493 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.66■□□□□ 0.58
CLDN4O14493 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.66■□□□□ 0.58
CLDN4O14493 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 AC099778.1-201ENST00000568593 1911 ntBASIC18.66■□□□□ 0.58
CLDN4O14493 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.66■□□□□ 0.58
CLDN4O14493 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLDN4O14493 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CLDN4O14493 AL391422.3-201ENST00000603791 2761 ntBASIC18.65■□□□□ 0.58
CLDN4O14493 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CLDN4O14493 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN4O14493 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.65■□□□□ 0.58
CLDN4O14493 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 AC069544.1-201ENST00000609399 999 ntBASIC18.65■□□□□ 0.58
CLDN4O14493 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN4O14493 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLDN4O14493 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CLDN4O14493 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN4O14493 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLDN4O14493 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.65■□□□□ 0.58
CLDN4O14493 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLDN4O14493 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
CLDN4O14493 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN4O14493 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLDN4O14493 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CLDN4O14493 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLDN4O14493 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 ABHD17AP1-201ENST00000358206 933 ntBASIC18.64■□□□□ 0.57
CLDN4O14493 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN4O14493 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN4O14493 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.64■□□□□ 0.57
CLDN4O14493 AC073648.6-201ENST00000641589 218 ntBASIC18.64■□□□□ 0.57
CLDN4O14493 AC124283.5-201ENST00000624661 1809 ntBASIC18.64■□□□□ 0.57
CLDN4O14493 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLDN4O14493 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.64■□□□□ 0.57
CLDN4O14493 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLDN4O14493 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN4O14493 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.63■□□□□ 0.57
CLDN4O14493 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN4O14493 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN4O14493 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN4O14493 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CLDN4O14493 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN4O14493 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
CLDN4O14493 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CLDN4O14493 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 AC116351.2-201ENST00000606540 1585 ntBASIC18.63■□□□□ 0.57
CLDN4O14493 AP001271.2-201ENST00000624018 1556 ntBASIC18.63■□□□□ 0.57
CLDN4O14493 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN4O14493 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN4O14493 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN4O14493 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN4O14493 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms