Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 YBX1P10-201ENST00000444752 975 ntBASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM88BA6NKF7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM88BA6NKF7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM88BA6NKF7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 AC139530.3-201ENST00000620344 690 ntBASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM88BA6NKF7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 STARP1-201ENST00000397973 869 ntBASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 AP000523.1-201ENST00000398242 1049 ntBASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TMEM88BA6NKF7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM88BA6NKF7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.14■■□□□ 1.3
TMEM88BA6NKF7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 AC127496.7-201ENST00000625110 1798 ntBASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.29
TMEM88BA6NKF7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms