Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 YBX1P1-201ENST00000445822 960 ntBASIC21.34■■□□□ 1.01
CCDC66A2RUB6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 SLC7A5P1-201ENST00000568957 537 ntBASIC21.34■■□□□ 1.01
CCDC66A2RUB6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC66A2RUB6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 BCL2-203ENST00000589955 5011 ntBASIC21.33■■□□□ 1.01
CCDC66A2RUB6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 AC091799.1-201ENST00000422823 811 ntBASIC21.33■■□□□ 1.01
CCDC66A2RUB6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC66A2RUB6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC66A2RUB6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC66A2RUB6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC66A2RUB6 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.33■■□□□ 1
CCDC66A2RUB6 AL049812.1-201ENST00000432563 2267 ntBASIC21.32■■□□□ 1
CCDC66A2RUB6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
CCDC66A2RUB6 RBM17P2-201ENST00000616397 1405 ntBASIC21.32■■□□□ 1
CCDC66A2RUB6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.32■■□□□ 1
CCDC66A2RUB6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.32■■□□□ 1
CCDC66A2RUB6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.32■■□□□ 1
CCDC66A2RUB6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.32■■□□□ 1
CCDC66A2RUB6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCDC66A2RUB6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC66A2RUB6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.32■■□□□ 1
CCDC66A2RUB6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC66A2RUB6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCDC66A2RUB6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC66A2RUB6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.31■■□□□ 1
CCDC66A2RUB6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.31■■□□□ 1
CCDC66A2RUB6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CCDC66A2RUB6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.31■■□□□ 1
CCDC66A2RUB6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CCDC66A2RUB6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.31■■□□□ 1
CCDC66A2RUB6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.31■■□□□ 1
CCDC66A2RUB6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
CCDC66A2RUB6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.31■■□□□ 1
CCDC66A2RUB6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.31■■□□□ 1
CCDC66A2RUB6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC66A2RUB6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC66A2RUB6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.31■■□□□ 1
CCDC66A2RUB6 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC66A2RUB6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCDC66A2RUB6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.3■■□□□ 1
CCDC66A2RUB6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC66A2RUB6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.3■■□□□ 1
CCDC66A2RUB6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC66A2RUB6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.3■■□□□ 1
CCDC66A2RUB6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.3■■□□□ 1
CCDC66A2RUB6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC66A2RUB6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC66A2RUB6 AC007322.3-201ENST00000426526 701 ntBASIC21.3■■□□□ 1
CCDC66A2RUB6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms