Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC005332.7-201ENST00000614046 2005 ntBASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 KRT8P17-201ENST00000453110 1448 ntBASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV21A0A0B4J279 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 KRT18P11-201ENST00000435214 1283 ntBASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 AC013268.1-206ENST00000638368 961 ntBASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 AC112229.1-201ENST00000639295 961 ntBASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV21A0A0B4J279 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV21A0A0B4J279 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV21A0A0B4J279 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV21A0A0B4J279 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV21A0A0B4J279 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV21A0A0B4J279 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 AC007322.4-201ENST00000509611 723 ntBASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV21A0A0B4J279 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 KRT8P20-201ENST00000423953 1409 ntBASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AC093484.2-201ENST00000580996 2166 ntBASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AL031963.3-201ENST00000606441 850 ntBASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AC100791.3-201ENST00000617619 330 ntBASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRAV21A0A0B4J279 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms