Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 AC080038.1-201ENST00000611274 1154 ntBASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAV4A0A0B4J268 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 HLA-G-202ENST00000376815 851 ntBASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 HLA-G-203ENST00000376818 1127 ntBASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 AC004911.1-201ENST00000416316 871 ntBASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 AL355472.2-201ENST00000422958 438 ntBASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 PTBP1P-201ENST00000554374 1601 ntBASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV4A0A0B4J268 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 AC133552.2-202ENST00000575694 574 ntBASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 AC073111.5-205ENST00000641717 521 ntBASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV4A0A0B4J268 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TRAV4A0A0B4J268 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms