Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC187A0A096LP49 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AC128688.1-201ENST00000487626 519 ntBASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AC010203.1-204ENST00000548782 407 ntBASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AC087388.1-201ENST00000571370 1112 ntBASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AC131212.4-201ENST00000623606 975 ntBASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 AC116351.2-201ENST00000606540 1585 ntBASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC187A0A096LP49 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TSPY14P-201ENST00000303979 915 ntBASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TUBB8P6-201ENST00000436895 1288 ntBASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 KRT16P6-202ENST00000425692 1426 ntBASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC187A0A096LP49 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 AL121603.2-201ENST00000557373 2117 ntBASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 CRYGFP-201ENST00000418459 633 ntBASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 AC097488.1-201ENST00000507834 756 ntBASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 KRT18P16-201ENST00000510337 1294 ntBASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CCDC187A0A096LP49 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 TFP1-202ENST00000475455 1573 ntBASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 AC004980.1-204ENST00000429707 299 ntBASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 AC011506.1-201ENST00000474329 610 ntBASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms