Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 PBX2P1-201ENST00000493219 1291 ntBASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 AP001330.3-201ENST00000520123 633 ntBASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 AL354811.1-201ENST00000610286 706 ntBASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 AL358852.1-201ENST00000623174 1268 ntBASIC17.02■□□□□ 0.32
TRAV18A0A075B6X5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 AC009237.14-201ENST00000609975 1594 ntBASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 RASA4CP-201ENST00000424092 1398 ntBASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.02■□□□□ 0.31
TRAV18A0A075B6X5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 AC091799.1-201ENST00000422823 811 ntBASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 LINC01465-201ENST00000408887 1940 ntBASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV18A0A075B6X5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV18A0A075B6X5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L2-201ENST00000561772 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L6-201ENST00000626483 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L1-201ENST00000627662 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L8-201ENST00000629013 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L3-201ENST00000630187 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L7-201ENST00000630678 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 DUX4L5-201ENST00000630834 1275 ntBASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRAV18A0A075B6X5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms