Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 RNU6-877P-201ENST00000383868 107 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 RPS3AP9-201ENST00000417027 792 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 PGAM1P3-201ENST00000420790 565 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 RNGTTP1-201ENST00000420965 728 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 IGLV3-4-201ENST00000432300 244 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 NIP7P1-201ENST00000433227 512 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC009229.1-201ENST00000450854 622 ntTSL 4 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC007000.1-201ENST00000453064 794 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 SULT1D1P-201ENST00000458020 882 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC092757.1-201ENST00000467293 467 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 TUBBP11-201ENST00000472255 252 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC109445.1-201ENST00000512356 383 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 PTP4A1P4-201ENST00000512479 322 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 NPM1P52-201ENST00000518264 846 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 OR5AN2P-201ENST00000534535 896 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC106028.1-201ENST00000554322 526 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC010487.1-201ENST00000594408 1172 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC009220.3-201ENST00000604318 586 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC244255.1-201ENST00000613463 398 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 TTK-211ENST00000627129 240 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 ZBTB43-203ENST00000449886 5851 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 NEPNP-201ENST00000404786 1371 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
LRCH3Q96II8 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AP001350.1-201ENST00000601906 1524 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 ZNF733P-202ENST00000444809 1573 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 ZSCAN31-219ENST00000611469 2669 ntTSL 4 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC009044.1-201ENST00000624577 1798 ntBASIC8.94□□□□□ -0.98
LRCH3Q96II8 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
LRCH3Q96II8 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 BBS9-203ENST00000355070 4004 ntAPPRIS P3 TSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 MYH2-204ENST00000532183 2528 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 PTBP2-202ENST00000370198 3054 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 Y_RNA.431-201ENST00000384086 102 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 RNU6-1160P-201ENST00000384546 104 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 MRPL32P1-201ENST00000406301 247 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC019181.1-201ENST00000417151 310 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL050321.1-201ENST00000432363 400 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
LRCH3Q96II8 EMC3-AS1-205ENST00000438698 534 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 PSPC1P1-201ENST00000442352 665 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 RPS7P4-201ENST00000444127 582 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 RPS4XP19-201ENST00000460237 736 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 NDUFB4P1-201ENST00000462398 381 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 RPL23AP80-201ENST00000495605 424 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 MRPL57P6-201ENST00000506570 309 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC112225.1-201ENST00000508230 297 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 LINC00520-202ENST00000554196 514 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL157687.1-201ENST00000554853 619 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL049869.4-201ENST00000555669 178 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC105275.2-201ENST00000567907 711 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 AL163952.1-202ENST00000569625 600 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 RN7SL619P-201ENST00000581753 258 ntBASIC8.93□□□□□ -0.98
LRCH3Q96II8 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC8.93□□□□□ -0.98
LRCH3Q96II8 AC233280.2-201ENST00000603917 1070 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms