Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.27□□□□□ -1.25
HPS3Q969F9 BMS1P11-201ENST00000442351 885 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.27□□□□□ -1.25
HPS3Q969F9 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC7.27□□□□□ -1.25
HPS3Q969F9 MORF4L1P4-201ENST00000450245 976 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.27□□□□□ -1.25
HPS3Q969F9 BMS1P9-201ENST00000457640 885 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC7.27□□□□□ -1.25
HPS3Q969F9 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.27□□□□□ -1.25
HPS3Q969F9 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.27□□□□□ -1.25
HPS3Q969F9 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.27□□□□□ -1.25
HPS3Q969F9 AC023818.1-201ENST00000498379 384 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC7.27□□□□□ -1.25
HPS3Q969F9 AC019227.1-201ENST00000526902 510 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AC005519.1-201ENST00000554490 601 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.27□□□□□ -1.25
HPS3Q969F9 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.27□□□□□ -1.25
HPS3Q969F9 PRELID3BP3-201ENST00000584963 545 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.27□□□□□ -1.25
HPS3Q969F9 AC004241.2-201ENST00000614562 444 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AP001264.1-201ENST00000620602 703 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AC063952.1-203ENST00000634410 658 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AC119674.1-220ENST00000641502 1048 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.27□□□□□ -1.25
HPS3Q969F9 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HPS3Q969F9 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
HPS3Q969F9 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HPS3Q969F9 AL157831.2-201ENST00000564681 3095 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
HPS3Q969F9 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.27□□□□□ -1.25
HPS3Q969F9 AC068446.1-201ENST00000556425 1549 ntBASIC7.27□□□□□ -1.25
HPS3Q969F9 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.27□□□□□ -1.25
HPS3Q969F9 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.26□□□□□ -1.25
HPS3Q969F9 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 RNU6-618P-201ENST00000363518 112 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
HPS3Q969F9 RN7SKP205-201ENST00000410999 307 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC096644.3-201ENST00000416788 338 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 Z68868.1-201ENST00000429048 544 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC022080.2-201ENST00000452932 533 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC117394.1-201ENST00000477323 567 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 NPM1P52-201ENST00000518264 846 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.26□□□□□ -1.25
HPS3Q969F9 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC027667.1-201ENST00000545814 304 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.26□□□□□ -1.25
HPS3Q969F9 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AC026367.3-201ENST00000619032 590 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.26□□□□□ -1.25
HPS3Q969F9 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
HPS3Q969F9 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 ZNF402P-201ENST00000404435 3100 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 CASC19-243ENST00000641588 1546 ntBASIC7.26□□□□□ -1.25
HPS3Q969F9 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
HPS3Q969F9 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.26□□□□□ -1.25
HPS3Q969F9 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC7.25□□□□□ -1.25
HPS3Q969F9 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 MAPK10-287ENST00000641217 3037 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.25□□□□□ -1.25
HPS3Q969F9 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
HPS3Q969F9 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.25□□□□□ -1.25
HPS3Q969F9 MAPK10-261ENST00000641050 3109 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 RNU1-5P-201ENST00000362684 144 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.25□□□□□ -1.25
HPS3Q969F9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 EEF1B2P8-201ENST00000414101 671 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.25□□□□□ -1.25
HPS3Q969F9 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.25□□□□□ -1.25
HPS3Q969F9 AC092106.2-201ENST00000436597 487 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 AL606490.8-201ENST00000441624 319 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
HPS3Q969F9 TVP23CP1-201ENST00000450317 639 ntBASIC7.25□□□□□ -1.25
HPS3Q969F9 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.25□□□□□ -1.25
HPS3Q969F9 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms