Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AL359704.2-201ENST00000604335 521 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 ATM-229ENST00000639953 587 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC087565.3-203ENST00000641018 837 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 OR7A1P-202ENST00000641542 1158 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC005332.9-201ENST00000620266 2921 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC016583.1-201ENST00000624221 2431 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 Z82209.2-201ENST00000623410 2012 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 SNORA56-201ENST00000383966 129 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 RPL12P3-201ENST00000440080 396 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AL390119.1-201ENST00000440329 312 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 LRRC37A14P-201ENST00000452297 462 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC114728.1-201ENST00000488289 483 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 OR7E157P-201ENST00000494376 911 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 HMGN2P6-201ENST00000551091 273 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AP002884.5-201ENST00000595053 1132 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 AL512329.2-201ENST00000607350 548 ntBASIC8.18□□□□□ -1.1
COL22A1Q8NFW1 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AL096829.1-201ENST00000413677 457 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 NMD3P2-201ENST00000421815 761 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC113412.1-201ENST00000425840 504 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 RPS17P15-201ENST00000475609 349 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 RN7SL547P-201ENST00000490793 290 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 RNU6-615P-201ENST00000516065 106 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 FAM27E4-201ENST00000605259 342 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AC073342.3-201ENST00000624211 193 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 METTL15-211ENST00000634762 718 ntTSL 5 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 AL049634.1-201ENST00000453770 1720 ntBASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 LIMCH1-218ENST00000513024 5129 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
COL22A1Q8NFW1 ATP9A-201ENST00000311637 7437 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 U3.2-201ENST00000362981 210 ntBASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 VDAC1P2-201ENST00000423609 850 ntBASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AC092017.2-201ENST00000427600 362 ntBASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 RPL35AP28-201ENST00000459730 331 ntBASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 SUMO2P7-201ENST00000511179 285 ntBASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 HIGD1AP5-201ENST00000529959 259 ntBASIC8.16□□□□□ -1.1
COL22A1Q8NFW1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms