Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AL356317.1-201ENST00000396110 1436 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL137141.1-201ENST00000624622 4836 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 SETP10-201ENST00000424368 814 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC113412.1-201ENST00000425840 504 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 RN7SL392P-201ENST00000473024 299 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL079303.1-201ENST00000486611 463 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC093325.1-201ENST00000508378 326 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC020937.1-201ENST00000519677 1013 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 OR7E161P-201ENST00000533722 967 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL031846.1-201ENST00000560933 314 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC011193.2-201ENST00000582638 367 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 SIGLEC31P-201ENST00000594237 551 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL359704.2-201ENST00000604335 521 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL135786.2-201ENST00000608422 615 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC004241.3-201ENST00000611728 517 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC015922.4-201ENST00000612568 690 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC073575.2-201ENST00000614212 627 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC010333.3-201ENST00000615100 402 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC007671.1-201ENST00000616957 830 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 OR1N1-202ENST00000619659 939 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC006453.3-201ENST00000635891 377 ntBASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
C11orf88Q6PI97 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 RNU4-23P-201ENST00000362839 140 ntBASIC5.81□□□□□ -1.48
C11orf88Q6PI97 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
C11orf88Q6PI97 RNU1-56P-201ENST00000391303 164 ntBASIC5.81□□□□□ -1.48
C11orf88Q6PI97 SNORA11D-201ENST00000408548 128 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms