Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 U91328.4-201ENST00000608919 517 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC068726.1-201ENST00000610993 341 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC020978.9-201ENST00000624380 1141 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 AC006511.3-201ENST00000624929 1783 ntBASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.33□□□□□ -1.4
ZNF549Q6P9A3 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC119674.1-213ENST00000641177 1386 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 GUCY1B2-204ENST00000531898 1979 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AL033519.1-201ENST00000407266 307 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 RN7SKP161-201ENST00000411110 305 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 UBTFL2-201ENST00000411859 1191 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 MTATP6P11-201ENST00000428071 670 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC234771.4-201ENST00000441416 730 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC111000.5-201ENST00000506559 1178 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 RNU2-45P-201ENST00000516068 187 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 COX6B1P4-201ENST00000519826 484 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC021269.1-201ENST00000526860 705 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 RPL41P2-201ENST00000544920 409 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC036176.3-201ENST00000602456 418 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AC024589.2-201ENST00000605642 1294 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 BNIP3P41-202ENST00000616656 861 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AP002371.2-201ENST00000624450 503 ntBASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ZNF549Q6P9A3 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC079248.1-201ENST00000427568 1546 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AL137918.1-201ENST00000624542 1922 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AL589826.1-201ENST00000340697 249 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 SNORD8-201ENST00000363915 110 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 RNA5SP478-201ENST00000364657 115 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AL139184.1-202ENST00000422303 222 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AL157884.1-201ENST00000424561 454 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 GTF2IP14-201ENST00000441415 586 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC092905.1-201ENST00000467527 949 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC106800.3-201ENST00000511389 308 ntBASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ZNF549Q6P9A3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms